Hello,
I have a problem with your server. I try to run the example to try different input of coevolution. But with my first try, just the test, but the job quit with an error.
I have open the file InterEvDock3.out and the error is the following:
… docking failed due to exception local variable ‘elt’ referenced before assignment
Traceback (most recent call last):
File “/scratch/user/quignot/scripts/InterEvDock3.py”, line 1063, in main
topN=nr_decoys,dthresh_contact=dthresh_contact, frodock_type_option=frodock_type_option)
File “/scratch/user/quignot/scripts/tools_docking.py”, line 220, in init
self.generate_top10_decoys(self.dockclustdat_cmapnb, self.top10CMAPnb, self.top10CMAPnbdir, decoyname=self.top10CMAPnbnames)
File “/scratch/user/quignot/scripts/tools_docking.py”, line 570, in generate_top10_decoys
oFro.create_frodock_decoys_for_coevomap(dockclustdat, outdir, version=self.frodock_version, decoys=top10_decoys, decoy_names=[decoyname.format(d) for d in range(1,11)])
File “/scratch/user/quignot/scripts/tools_frodock.py”, line 983, in create_frodock_decoys_for_coevomap
decoy_str = regroup_list(decoys)
File “/scratch/user/quignot/scripts/tools_frodock.py”, line 951, in regroup_list
if len(elt) > 1:
UnboundLocalError: local variable ‘elt’ referenced before assignment
Respectfully
Romain Launay
Session information:
- id: N11349681488991
- email: None
- activated?: True
- authenticated?: False
Job information:
- id: https://mobyle.rpbs.univ-paris-diderot.fr/data/jobs/InterEvDock3/Q20176029444933
- date: Fri, 01 Oct 2021 09:52:57 +0000
- status: finished
- user error in parameter: None
- user error message: None