Help on job https://mobyle.rpbs.univ-paris-diderot.fr/data/jobs/PEP-FOLD/J28301613620043

[3219030734]

Hello,

I used the demonstrated example to get the structure predicted by PEP-FOLD, but it does not show S-S bond in PDB format and there are still two separate Cysteine residues. I wonder if there is any reason for that.

Shi Guobang

Session information:

• id: 6742f4b0ec05c5166fcc49d6da11fb8a
• email: 3219030734@stu.cpu.edu.cn
• activated?: True
• authenticated?: True

Job information:

• id: https://mobyle.rpbs.univ-paris-diderot.fr/data/jobs/PEP-FOLD/J28301613620043
• date: Mon, 12 Jul 2021 11:15:18 +0000
• status: finished
• user error in parameter: None
• user error message: None

[devries]

Hello,
PEP-FOLD only models backbone and C-beta. The actual disulfide bonds are not being added, but the C-beta positions are compatible,
cheers
Sjoerd