Help on job https://mobyle.rpbs.univ-paris-diderot.fr/data/jobs/PEP-FOLD3/A12550400099993

[dominique.lallemand]

is there a way to model peptides containing non natural amino acids, such as norleucine or cyclobutylalanine using using pep fold ?

Session information:

• id: S07296015692949
• email: None
• activated?: True
• authenticated?: False

Job information:

• id: https://mobyle.rpbs.univ-paris-diderot.fr/data/jobs/PEP-FOLD3/A12550400099993
• date: Wed, 20 Oct 2021 17:45:29 +0000
• status: finished
• user error in parameter: None
• user error message: None

[devries]

Unfortunately, no. The force field and fragment library miss the parameters for such amino acids.
best
Sjoerd