Dear sir,
I plan to use the pepfold3 to predict the structures given the following protein sequences.I put the input data like below. But the results (from all models ) seems have the exact same sequence. How do I do predict for mutiple sequences? do I have to do like predict one by one ?
3118_test_cases/target_j2148_TrainingIndex23541.pdb ???:A
YFSGTKVKWILDHV
3118_test_cases/target_j1471_TrainingIndex17775.pdb ???:A
YSSNFRNLLNIFGE
3118_test_cases/target_j2368_TrainingIndex25350.pdb ???:A
EDIGLNAYYFFFHI
3118_test_cases/target_j1661_TrainingIndex19987.pdb ???:A
FSNLTLEHINAILL
3118_test_cases/target_j2273_TrainingIndex24734.pdb ???:A
IRKEYWRYIGRSLQ
3118_test_cases/target_j2364_TrainingIndex25335.pdb ???:A
ATLETRQMNRRYYE
3118_test_cases/target_j2201_TrainingIndex23986.pdb ???:A
RDASYVFARRALKS
3118_test_cases/target_j1978_TrainingIndex21905.pdb ???:A
LNVHVGHELYGGSF
3118_test_cases/target_j1053_TrainingIndex12495.pdb ???:A
FGNYVIQKFFEFGS
3118_test_cases/target_j1859_TrainingIndex21278.pdb ???:A
SGYLDDVSAKFDTG
3118_test_cases/target_j145_TrainingIndex2077.pdb ???:A
CQNEEKFQLLAKIP
3118_test_cases/target_j2197_TrainingIndex23973.pdb ???:A
GEEKEAIFEGHIML
3118_test_cases/target_j1096_TrainingIndex13173.pdb ???:A
VIASERMHIVDMFG
3118_test_cases/target_j128_TrainingIndex1849.pdb ???:A
TNVIFCILSRFAQC
3118_test_cases/target_j1208_TrainingIndex14925.pdb ???:A
SLFDIVNTIRQAKD
3118_test_cases/target_j1686_TrainingIndex20394.pdb ???:A
QQRSKTLGFGFGVT
3118_test_cases/target_j1865_TrainingIndex21291.pdb ???:A
STTLIDQAKDRIQK
3118_test_cases/target_j1454_TrainingIndex17632.pdb ???:A
ADSFQSMYTQMLCG
3118_test_cases/target_j1701_TrainingIndex20510.pdb ???:A
LNYFNALSAVRDVL
3118_test_cases/target_j2001_TrainingIndex22043.pdb ???:A
EGAMRLWAHHAAAH
3118_test_cases/target_j1188_TrainingIndex14721.pdb ???:A
TLKDACNEALRDWS
3118_test_cases/target_j2058_TrainingIndex22594.pdb ???:A
ATHLDAAVDTLVRC
3118_test_cases/target_j145_TrainingIndex2077.pdb ???:A
CQNEEKFQLLAKIP
3118_test_cases/target_j1023_TrainingIndex12176.pdb ???:A
KARNITSHYLKLLE
3118_test_cases/target_j2348_TrainingIndex25249.pdb ???:A
LNSIKVVTELRSKH
3118_test_cases/target_j139_TrainingIndex2008.pdb ???:A
LLKIDHVRALTEMP
3118_test_cases/target_j1752_TrainingIndex20792.pdb ???:A
SGKYTEIYKKWFGK
3118_test_cases/target_j1515_TrainingIndex18460.pdb ???:A
KMANYVAMEDWINV
3118_test_cases/target_j1335_TrainingIndex16365.pdb ???:A
VNEKTKLLAICNFY
3118_test_cases/target_j1718_TrainingIndex20621.pdb ???:A
QGDNLIKYIEPKVA
3118_test_cases/target_j1294_TrainingIndex15716.pdb ???:A
LSGGASINRIFHER
3118_test_cases/target_j1132_TrainingIndex14090.pdb ???:A
SLAHMSTKIAKRVA
3118_test_cases/target_j1256_TrainingIndex15373.pdb ???:A
LSGGASINRIFHER
3118_test_cases/target_j2139_TrainingIndex23488.pdb ???:A
GEEDLCAAFNVICD
3118_test_cases/target_j2138_TrainingIndex23476.pdb ???:A
MTLSQVKGFVRKNG
3118_test_cases/target_j1820_TrainingIndex21108.pdb ???:A
QDAKWRTSQARRPF
3118_test_cases/target_j1233_TrainingIndex15138.pdb ???:A
TNDVALQGIDMYIK
3118_test_cases/target_j1243_TrainingIndex15244.pdb ???:A
DDYIKIAFEIAKEY
3118_test_cases/target_j1002_TrainingIndex11901.pdb ???:A
NYEGIVNRVTARFG
3118_test_cases/target_j1009_TrainingIndex11981.pdb ???:A
VNPDLFDQQLQKMK
3118_test_cases/target_j1386_TrainingIndex16941.pdb ???:A
SERAHVFYKCLLKS
3118_test_cases/target_j1398_TrainingIndex17104.pdb ???:A
ATMGERRRFWEKFF
3118_test_cases/target_j1305_TrainingIndex15881.pdb ???:A
GSLHKRRQALGFIY
3118_test_cases/target_j1306_TrainingIndex15889.pdb ???:A
STGSTQAKFFLKNG
3118_test_cases/target_j1533_TrainingIndex18585.pdb ???:A
FELPYGSKLFVEKQ
3118_test_cases/target_j1579_TrainingIndex19070.pdb ???:A
EGELFTWWLQFFGG
3118_test_cases/target_j1367_TrainingIndex16747.pdb ???:A
VNEKTKLLAICNFY
3118_test_cases/target_j1995_TrainingIndex22002.pdb ???:A
YSGIFNSSVEYLQR
3118_test_cases/target_j224_TrainingIndex2976.pdb ???:A
PINASIDVINVLNQ
3118_test_cases/target_j2153_TrainingIndex23570.pdb ???:A
APALFDGVLDWISG
3118_test_cases/target_j1378_TrainingIndex16866.pdb ???:A
YSKNIAQDFVKDNG
3118_test_cases/target_j1335_TrainingIndex16365.pdb ???:A
VNEKTKLLAICNFY
3118_test_cases/target_j2273_TrainingIndex24734.pdb ???:A
IRKEYWRYIGRSLQ
3118_test_cases/target_j1363_TrainingIndex16694.pdb ???:A
ITSEWLTTMREKWL
3118_test_cases/target_j1706_TrainingIndex20530.pdb ???:A
GNPIKNVYESYAKF
3118_test_cases/target_j1550_TrainingIndex18856.pdb ???:A
KMANYVAMEDWINV
3118_test_cases/target_j103_TrainingIndex1596.pdb ???:A
QYDLAIHSYEEGAV
3118_test_cases/target_j1666_TrainingIndex20049.pdb ???:A
SDTSLLESTIADIA
3118_test_cases/target_j1765_TrainingIndex20878.pdb ???:A
LNDKCDRLRKAYGE
3118_test_cases/target_j1305_TrainingIndex15881.pdb ???:A
GSLHKRRQALGFIY
3118_test_cases/target_j1269_TrainingIndex15500.pdb ???:A
EHMAEWFMEGLIER
3118_test_cases/target_j1487_TrainingIndex17987.pdb ???:A
LFLAQEIIRKKRDG
3118_test_cases/target_j111_TrainingIndex1659.pdb ???:A
KHILEEIADVVHKY
3118_test_cases/target_j1611_TrainingIndex19438.pdb ???:A
AADEKWQFYWELHV
3118_test_cases/target_j1556_TrainingIndex18905.pdb ???:A
SDYSKRTEKNVLDS
3118_test_cases/target_j2111_TrainingIndex23184.pdb ???:A
CNRRKCHKALRQFF
3118_test_cases/target_j2080_TrainingIndex22747.pdb ???:A
SLKFEFATVFRLVN
3118_test_cases/target_j1005_TrainingIndex11959.pdb ???:A
TPARDLNQLYLTAE
3118_test_cases/target_j2099_TrainingIndex22937.pdb ???:A
GVRAAWQGLRGWLD
3118_test_cases/target_j224_TrainingIndex2976.pdb ???:A
PINASIDVINVLNQ
3118_test_cases/target_j2304_TrainingIndex24932.pdb ???:A
RSVFLGKIKDAFDR
3118_test_cases/target_j1623_TrainingIndex19581.pdb ???:A
EDIESINMYNERLA
3118_test_cases/target_j1121_TrainingIndex13850.pdb ???:A
WPAAIISLMGLQAL
3118_test_cases/target_j1571_TrainingIndex19010.pdb ???:A
NNMYWLSCTTALLG
3118_test_cases/target_j1655_TrainingIndex19950.pdb ???:A
HFEEGWYMWLQSRD
3118_test_cases/target_j1564_TrainingIndex18970.pdb ???:A
NNMYWLSCTTALLG
3118_test_cases/target_j1887_TrainingIndex21411.pdb ???:A
SGYLDDVSAKFDTG
3118_test_cases/target_j2284_TrainingIndex24833.pdb ???:A
TSDTEFSRTVIHEF
3118_test_cases/target_j1582_TrainingIndex19085.pdb ???:A
NNMYWLSCTTALLG
3118_test_cases/target_j1340_TrainingIndex16385.pdb ???:A
VNEKTKLLAICNFY
3118_test_cases/target_j1888_TrainingIndex21412.pdb ???:A
DASIDYNNKKSIIK
3118_test_cases/target_j1871_TrainingIndex21350.pdb ???:A
GSRQEVDLCMAFRD
3118_test_cases/target_j229_TrainingIndex3005.pdb ???:A
GTDFQQRVWKALLT
3118_test_cases/target_j1324_TrainingIndex16185.pdb ???:A
AALIGYYSKEAEAG
3118_test_cases/target_j1104_TrainingIndex13316.pdb ???:A
KSNNEMLKMQSQFN
3118_test_cases/target_j1472_TrainingIndex17781.pdb ???:A
LAFINGMDIAARML
3118_test_cases/target_j1041_TrainingIndex12396.pdb ???:A
RLYPLYAFCEDNGI
3118_test_cases/target_j2382_TrainingIndex25455.pdb ???:A
EDIGLNAYYFFFHI
3118_test_cases/target_j165_TrainingIndex2332.pdb ???:A
CLQAAADSIFFKYL
3118_test_cases/target_j1745_TrainingIndex20752.pdb ???:A
EHYGTVADVAHEND
3118_test_cases/target_j1033_TrainingIndex12323.pdb ???:A
LNEDSRLFLQRGYL
3118_test_cases/target_j2011_TrainingIndex22124.pdb ???:A
ARGWAWTRALLGLC
3118_test_cases/target_j1772_TrainingIndex20930.pdb ???:A
QGDNLIKYIEPKVA
3118_test_cases/target_j1675_TrainingIndex20178.pdb ???:A
FDYEGLIDSELQKK
3118_test_cases/target_j1694_TrainingIndex20456.pdb ???:A
GNPIKNVYESYAKF
3118_test_cases/target_j2066_TrainingIndex22644.pdb ???:A
DGDAVLANRRMLNL
3118_test_cases/target_j1016_TrainingIndex12086.pdb ???:A
YLSAANKFAKRHRA
3118_test_cases/target_j1835_TrainingIndex21172.pdb ???:A
APTWAYVEGLYWKS
3118_test_cases/target_j1086_TrainingIndex12897.pdb ???:A
IGREASIALFDQMR
3118_test_cases/target_j2304_TrainingIndex24932.pdb ???:A
RSVFLGKIKDAFDR
3118_test_cases/target_j1333_TrainingIndex16317.pdb ???:A
VNEKTKLLAICNFY
3118_test_cases/target_j214_TrainingIndex2873.pdb ???:A
DGPQCRDYVISLGV
3118_test_cases/target_j1362_TrainingIndex16685.pdb ???:A
VNEKTKLLAICNFY
3118_test_cases/target_j1219_TrainingIndex15036.pdb ???:A
PPFEHCILGRQLLG
3118_test_cases/target_j2393_TrainingIndex25519.pdb ???:A
NDELFRDFLLRAAK
3118_test_cases/target_j1453_TrainingIndex17629.pdb ???:A
YNVLAIQSFAKWFY
3118_test_cases/target_j1852_TrainingIndex21253.pdb ???:A
SGYLDDVSAKFDTG
3118_test_cases/target_j1635_TrainingIndex19714.pdb ???:A
EATRTLGAYTRDII
3118_test_cases/target_j1945_TrainingIndex21739.pdb ???:A
NDLPSSFTGYFKKF
3118_test_cases/target_j1654_TrainingIndex19937.pdb ???:A
HFEEGWYMWLQSRD
3118_test_cases/target_j1968_TrainingIndex21857.pdb ???:A
DNNVSKMTKNVLNQ
3118_test_cases/target_j1462_TrainingIndex17699.pdb ???:A
SIHDYLGQWASTFG
3118_test_cases/target_j1853_TrainingIndex21254.pdb ???:A
SGYLDDVSAKFDTG
3118_test_cases/target_j119_TrainingIndex1742.pdb ???:A
KDDAYKWLLHNTKR
3118_test_cases/target_j2087_TrainingIndex22840.pdb ???:A
DGDAVLANRRMLNL
3118_test_cases/target_j237_TrainingIndex3076.pdb ???:A
SDVWAKWLEMWRQA
3118_test_cases/target_j1678_TrainingIndex20225.pdb ???:A
FSNLTLEHINAILL
3118_test_cases/target_j1545_TrainingIndex18813.pdb ???:A
NMHKVWMDKVSKES
3118_test_cases/target_j1068_TrainingIndex12647.pdb ???:A
SSTAARDNGIKSVM
3118_test_cases/target_j1799_TrainingIndex21050.pdb ???:A
SGYLDDVSAKFDTG
3118_test_cases/target_j1168_TrainingIndex14570.pdb ???:A
ISAARMATYMDTID
3118_test_cases/target_j1384_TrainingIndex16932.pdb ???:A
EGEDVINTGKAMQA
3118_test_cases/target_j1628_TrainingIndex19652.pdb ???:A
TDRVRESLFNIVTA
3118_test_cases/target_j1946_TrainingIndex21741.pdb ???:A
PSPYLQRVHNYFRM
3118_test_cases/target_j2125_TrainingIndex23355.pdb ???:A
NLALLIYLMRMVKA
3118_test_cases/target_j1669_TrainingIndex20105.pdb ???:A
QQRSKTLGFGFGVT
3118_test_cases/target_j1273_TrainingIndex15541.pdb ???:A
SKAEDAWAKSIDGH
3118_test_cases/target_j1627_TrainingIndex19640.pdb ???:A
FSVNQKTAFSKLER
3118_test_cases/target_j1508_TrainingIndex18407.pdb ???:A
DRLFMLESAMGRLC
3118_test_cases/target_j2295_TrainingIndex24887.pdb ???:A
VGGQELEHIAISTN
3118_test_cases/target_j2004_TrainingIndex22050.pdb ???:A
TWANADAWEDYLAD
3118_test_cases/target_j116_TrainingIndex1704.pdb ???:A
IGRNAVDAFRVNVI
3118_test_cases/target_j1576_TrainingIndex19031.pdb ???:A
QNPSKFINDVLFWE
3118_test_cases/target_j2264_TrainingIndex24609.pdb ???:A
KNDHDKSIFINMLK
Session information:
- id: ae666975770cd5729e72dd6eceb62392
- email: xuezhi.xie@kimlab.org
- activated?: True
- authenticated?: True
Job information:
- id: RPBS Web Portal
- date: Mon, 05 Dec 2022 22:54:12 +0000
- status: finished
- user error in parameter: None
- user error message: None