Help on job https://mobyle.rpbs.univ-paris-diderot.fr/data/jobs/PEP-FOLD3/S27259066479921

Thank you for clearing the queue and adding a Captcha. My jobs run quickly now.

Unfortunately, PEPFOLD3.py now crashes because it cannot find clusters.txt.

Here is the stacktrace:

PyPPP3Exec -s iSeq.fasta -l FtsZ_full_linker -v --2012
CppBuilder_service --objective sopep --action pepbuild --generator fbt --iPrf FtsZ_full_linker.svmi8.27.prob --iSeq FtsZ_full_linker.seq --label FtsZ_full_linker --rndFrom 100 --heapSze 300 --mcSteps 30000 --nc 8 --nSim 100 --prfFilter none --ts_sze 5 --seed 56158
POSTTTExec --mask “ene1-mc.pdb" --oscar --pattern "-ID_bestene1-mc.pdb” --parallelposttreatment --noSuperpose --padding 5 --silent -v
Traceback (most recent call last):
File “/service/env/PEPFOLD3.5/PEPFOLD3.py”, line 1323, in
main(sys.argv)
File “/service/env/PEPFOLD3.5/PEPFOLD3.py”, line 1315, in main
job.runPepFold(verbose = True)
File “/service/env/PEPFOLD3.5/PEPFOLD3.py”, line 1216, in runPepFold
self.runClustersTools()
File “/service/env/PEPFOLD3.5/PEPFOLD3.py”, line 984, in runClustersTools
f = open(“clusters.txt”)
IOError: [Errno 2] No such file or directory: ‘clusters.txt’

Session information:

  • id: H21499300983906
  • email: None
  • activated?: True
  • authenticated?: False

Job information:

I am sorry, I had missed your help request and your job no longer exists. Is it working correctly for you now?
best
Sjoerd

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